Published Research

Explore our peer-reviewed publications advancing the science of microbiome diagnostics, personalized medicine, and therapeutic interventions.

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Showing 8 publications

Microbiology

Longitudinal Analysis of Microbiome Stability and Resilience Following Antibiotic Exposure

Rodrigues T, Santos M, Silva P

Microbiome

July 2025

67 citations

This two-year longitudinal study tracked microbiome composition in 150 individuals before, during, and after antibiotic treatment. We identified key factors influencing microbiome resilience and recovery, including baseline diversity, antibiotic class, and dietary patterns. Our findings inform strategies for microbiome protection and restoration following antibiotic exposure.

Nutrition Science

Machine Learning Algorithms Predict Personalized Dietary Responses Based on Gut Microbiome Profiles

Silva P, Costa A, Santos M, Ferreira J

Cell Metabolism

June 2025

102 citations

We developed and validated machine learning models that predict individual glycemic responses to specific foods based on gut microbiome composition. Training on data from 800 participants, our algorithms achieved 84% accuracy in predicting postprandial glucose responses. This work advances the field of precision nutrition and demonstrates the clinical utility of microbiome-based dietary recommendations.